CDS

Accession Number TCMCG016C04477
gbkey CDS
Protein Id OMO96591.1
Location complement(join(3799..3948,4841..4900,4986..5220,5525..5662,5765..5983,6593..8280,8501..8732,8900..9240,9325..9519,10281..10496,11327..11632))
Organism Corchorus capsularis
locus_tag CCACVL1_04879

Protein

Length 1259aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01007409.1
Definition Zinc finger, RING-type [Corchorus capsularis]
Locus_tag CCACVL1_04879

EGGNOG-MAPPER Annotation

COG_category O
Description Zinc ion binding
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K16276        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006873        [VIEW IN EMBL-EBI]
GO:0006875        [VIEW IN EMBL-EBI]
GO:0006879        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008270        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010106        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030003        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0046916        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055065        [VIEW IN EMBL-EBI]
GO:0055072        [VIEW IN EMBL-EBI]
GO:0055076        [VIEW IN EMBL-EBI]
GO:0055080        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGCGGTGGCCGTGCTCCCAAAGACCCGCCGGACAAGGAGGACCAGGCGCGGCCCTCGCCGTCTTCCCCTCCGCTACTGCTTCCTGCGGTGGCCGCTACACGGCTCGCCGATGCTCCTATACTTCTGCTGGTTTATTTCCATAACGCTATACGCGCGGAGCTTTCTGAGCTCCGCCGCGTTGCATTGGCTGCTGCTGCAGAGGCGAAGAGTGTGTCCGAAGCGCGGGGATTCGTGGTTGAGCTTTCTAGAAGGTTCGAGTTTCTTAATCTTGTTTACAAGTATCACTGCGCTGCTGAAGATGAGGTTGTCTTTTTAGCGCTTGATGAACATGTTCATAATGTGGCTTGTACATATTCGCTGGAGCATGAAGGTATAGACGCTCTCTTTGATTCTGTTTCCTGTTGCTTGAATGGATTGGAGGAAACTGAAAATACCTCCAAAGCATTGCAAGAACTCGTGTTTTGCATTGGCACCATCCAATCTTCTATATGCAAGCATATGTTGAAAGAAGAAAAGCAGGTTTTGCCTCTGCTTGTGAAGCAGTTTAATTCCGAAGAACAAGCTTCTCTGCTGTGGCAGTTCATTGGGAGCATCCCTGTAATTCTTCTGGAGGATTTTCTTCCATGGATGATCTCCTTTGTCCATCCAGATGAGCAAGAAGAAATTAAATTTTGTATAAGAGAAGTTGTACCAAAGGAAAGATCATTGCAAGAGTTGGTAGTATCCTGGCTTGCTAAGGAACACCAAACCACGTTTGGGTTCCAGAAAGAGCTAGCAAAAGGAGTTCGACCTCTTTCTGGACCCACTGCTATCAAGGGCAAATTCAAATTCCAATTAACTAAGAGGCCTCTTGGGTGGAAGAAAGTGTCCTATTTCCCAACAAATATTGGAAATAATCCAGTTGATGGTCTTCGTCTCTGGCATGCTGCTATCCAAAAAGATTTGAAAGATATTCTAGTAGAGCTGCATCAAATAAAAATATCAAGTTACTTTCAAAATCTAGATTTTATTGTTCTTCGACTGAAATTCCTTGTAGATGTTTTATTCTTCTACAGTAATGCAGTGGACAAGTTCTTTTACCCTCTCTTTGTTGATATTTCCAACATTCAGCTGTCTCTGCCCACCCAACATCTCCAAATAGCAAGTCATATTGAACAGTTACATTACTTGCTGCATTATAATGATCAAAAGGGGCTACCCACAAATGAGTTTGTGGTGAAGCTGTGCCAGAAAGTGGAATCCTTGGTGCTGGATGTTGCCACACAATTTGGTTTACAAGAAAAGGAGGTATTTCCTGTCATTAGCAAGAACTGCAGCCAAGAAACACAGAAGCAGCTTCTCTGCATGAGCCTTCATGTGTTGCCTGTTGGGTTGCTAAAATGTGTGATTACCTGGTTTGCTTCTCATTTATCTGAGGATGAATCTAGGTCCATTCTGCTGATTATAAACCAGGGAAATTCTTTGATCAACAAATCTTTTGCATCCCTCCTGTCGGATTGGTTCCATATAGGTTATTCAGGAAAAACCTCAGTTGAAAGCTTCAGGAGGGACTTGGAGAAACTATTCCAGAGCAGATGCTCTTTTCTTCCCGAGCCGATTGAGGAAGATGCTGAATCTTCTTCCTTACTTTCAGATATGTTACCCAGTAAAGGACCTAAATCTAAGCTAGTTAAACCAGCTTTTGTCAATAATGGAAAGAAGGGGTTCTCTTTTTCTTCAGCTAGTTCCGATGGCATTAAGCATTTTGAGACATCATACTGCAGTGGAATCAATTTGCATATAAATTTCCCCAAAATGATAAGGGCATTATACTCTTTTTCAAAATTTCCTGGTGAGAAGAGTTGTGTTGATTCTGGTATTGATGAACCAATACCAATGGATCTAATTTTTTTCTTCCATAAGGCCCTAAAGAAAGATTTGGATTACCTCGTTTTTGGTTCAGCCAAGCTGGCTGAAAATGTTGGGTTTCTTACAGAGTTCCACCAACGGTTCCATTTGATACAGTTATTATATCAGATCCATAGTGATGCGGAAGATGAGATAGCCTTTCCAGCTTTGGAAGCAAAGGGGAAACTCCAAAATATCAGCCACTCCTACGCCATTGACCATAAACTGGAAGGTGAAAACTTCAGCGAGATATCCCTTATTTTAGAGGAGATGTATGAACTGCACAACAATACAACTTCTAATGCCAATACATTGGACAGTGTGGTGAAGCACCAGCAGCTGTGTCTTAATCTCCAAGATAAATGCAAAGCAATGCACAAGTTACTATCGGATCATGTGCTTCATGAAGAAGTTGAACTTTGGCCCTTATTTAGAGAATGTTTCTCCCTTGAGGAGCAAGAAAAGATAATAGGAAACATGCTAGGAAGAACAGGAGCAGAAATACTACAAGACATGATACCCTGGCTTTTGGAATCTTTGACTCTGAAAGAACAGCAATCCATTATGTCCTTATGGCACAAGGCTGCAAGAAATACAATGTTTGATGAATGGTTAGGAGAGTGGTGGGAAGGACATAAAATAGCCAAGGCAGAAGAGGAGTCTACTACTCCTTCTAGGACTGCAGATCCATTGGAGATTATCTCTACCTATTTGCCTAGAGTTCTTGATGAACAACAAGCCATTTATGGCAATCTTTTAAGAGCTAATTCCAGTGGTGCTGATATCGGGCAGCAAGAATTGTCCAATTCAGATAATAAAGAAAAGGCTATTAAAGGAGATCAAAAGTGCTCTGAATGTTCAGCACTGTTCTGTAGAAGCACTGACAAGCGATGCAATAAAGCAAATGATCTTAAGGACAGTACCAATAAACCAGGTCAAAATTTCCAAGTAACTCAGAACTTTGGGGAATGCGGGCACCTAATGACAATGAGTCAAGAAGATCTAGAGGCTGCCATAAGAAGAGTTTCCTCTGACACATCCTTGGATCCTGGAAGGAAATCACATGTGATGCAGAACTTGCTAATGAGCCGTTGGATTCTTAAGCAACAGATATCTAATTTAGAAGTAAACAATTCACATAACGGAGAAGGAATTCCAGGTCAGCATCCATCTTATCGGGACCCTCTGCAACTAGCTTTGGGTTGCAAACACTATAAGAGGAACTGTAAGCTTCTTGCCGAATGTTGCAACCAGCTTTATACATGCATTCGTTGCCATGATGAGGTGGCTGATCATTCGTTGGATAGAAAATCTGTCAAAAAAATGATGTGTATGAAATGCTTGACAATCCAGCCCATTGGATCCACGTGCTCAACTATTTCCTGCAATAATCTATCCATGGGAAAATATTATTGCAGGATATGCAAGATATTTGATGATGAAAGGGAAATTTATCACTGCCCTTACTGTAATCTCTGTCGAGTTGGGAAGGGCTTGGGAATTGACTACTTTCATTGCATGAAATGCAATGCCTGCATGTCTCGAGCTCTATCAAATCACATATGCAGAGAAAAATGTTTTGAGGACAATTGTCCTATATGCCATGAAGACTTGTTTACCTCCAGCGCTCCAGTAAAGGCACTTCCATGTGGACATTTAATGCACTCAATTTGTTTTCAGGATTATACTTGTACACATTACACCTGCCCAATCTGTAGCAAGTCACTTGGGGACATGCAGGTGTACTTCAGGATGTTGGATGCATTGTTGTTGGAGGAGAAAATTCCAGATGAATATCATGGTCGACCTCAGGTTCGTCGTGCTTTTGTTCCTATCTATGGTACTTACCTTTGTTCTAGTGTTATTGGAAACTCTGCTTTGACTAAATGA
Protein:  
MGGGRAPKDPPDKEDQARPSPSSPPLLLPAVAATRLADAPILLLVYFHNAIRAELSELRRVALAAAAEAKSVSEARGFVVELSRRFEFLNLVYKYHCAAEDEVVFLALDEHVHNVACTYSLEHEGIDALFDSVSCCLNGLEETENTSKALQELVFCIGTIQSSICKHMLKEEKQVLPLLVKQFNSEEQASLLWQFIGSIPVILLEDFLPWMISFVHPDEQEEIKFCIREVVPKERSLQELVVSWLAKEHQTTFGFQKELAKGVRPLSGPTAIKGKFKFQLTKRPLGWKKVSYFPTNIGNNPVDGLRLWHAAIQKDLKDILVELHQIKISSYFQNLDFIVLRLKFLVDVLFFYSNAVDKFFYPLFVDISNIQLSLPTQHLQIASHIEQLHYLLHYNDQKGLPTNEFVVKLCQKVESLVLDVATQFGLQEKEVFPVISKNCSQETQKQLLCMSLHVLPVGLLKCVITWFASHLSEDESRSILLIINQGNSLINKSFASLLSDWFHIGYSGKTSVESFRRDLEKLFQSRCSFLPEPIEEDAESSSLLSDMLPSKGPKSKLVKPAFVNNGKKGFSFSSASSDGIKHFETSYCSGINLHINFPKMIRALYSFSKFPGEKSCVDSGIDEPIPMDLIFFFHKALKKDLDYLVFGSAKLAENVGFLTEFHQRFHLIQLLYQIHSDAEDEIAFPALEAKGKLQNISHSYAIDHKLEGENFSEISLILEEMYELHNNTTSNANTLDSVVKHQQLCLNLQDKCKAMHKLLSDHVLHEEVELWPLFRECFSLEEQEKIIGNMLGRTGAEILQDMIPWLLESLTLKEQQSIMSLWHKAARNTMFDEWLGEWWEGHKIAKAEEESTTPSRTADPLEIISTYLPRVLDEQQAIYGNLLRANSSGADIGQQELSNSDNKEKAIKGDQKCSECSALFCRSTDKRCNKANDLKDSTNKPGQNFQVTQNFGECGHLMTMSQEDLEAAIRRVSSDTSLDPGRKSHVMQNLLMSRWILKQQISNLEVNNSHNGEGIPGQHPSYRDPLQLALGCKHYKRNCKLLAECCNQLYTCIRCHDEVADHSLDRKSVKKMMCMKCLTIQPIGSTCSTISCNNLSMGKYYCRICKIFDDEREIYHCPYCNLCRVGKGLGIDYFHCMKCNACMSRALSNHICREKCFEDNCPICHEDLFTSSAPVKALPCGHLMHSICFQDYTCTHYTCPICSKSLGDMQVYFRMLDALLLEEKIPDEYHGRPQVRRAFVPIYGTYLCSSVIGNSALTK